I offer an explanation of Yves Daoust's answer, as well as some variations.
The number of pairs $(j,k)$ that satisfy $1\leq j < k \leq n$ is
$1 + 2 + 3 + \cdots + (n - 1) = \frac12 n(n-1).$
In order to turn the double sum into a single sum, the idea is to let $m$ range over $1, 2, \ldots, \frac12 n(n-1)$ to get the correct number of terms, and for each $m$ somehow obtain $i$ and $j$ as a function of $m$ in such a way that each pair of values $(i,j)$ occurs only once.
Now for $n > 1,$ compare the sum for $1\leq j < k \leq n$ with the sum for $1\leq j < k \leq n - 1.$ The larger sum has exactly $n - 1$ terms that the other sum does not, namely the terms $(1,n), (2,n), \ldots, (n-1,n).$
Assuming (for the moment) that we use the same formulas to get $j$ and $k$ from $m$ in both sums,
the "new" terms in the sum for $1\leq j < k \leq n$ must be the last $n-1$
terms of the sum, that is, the terms for
$\frac12 n(n-1) - (n-2) \leq m \leq \frac12 n(n-1).$
To make this work, we need a function $f$ such that
$f\left(\frac12 n(n-1) - (n-2)\right) = f\left(\frac12 n(n-1)\right) = n$
but $f\left(\frac12 n(n-1) - (n-1)\right) = n - 1$
and $f\left(\frac12 n(n-1) + 1\right) = n + 1.$
The fact that the function has to be constant for a range of input values and then increase by one for the next range of input values suggests that we use some kind of rounding function,
such as the "floor" function $\lfloor \cdot \rfloor,$
to force the values of some other increasing function to be zero.
If we use the "floor" function for that purpose, it is sufficient to find any function $g$ such that
$g\left(\frac12 n(n-1) - (n-2)\right) = n$ for all positive $n,$ and then $f(m) = \lfloor g(m) \rfloor$ will give us the desired value of $k.$
To find such a function, let $m = \frac12 k(k-1) - (k-2),$
so that $g(m) = k,$ and solve for $k.$
For a given value of $m,$ a little algebraic manipulation gives us a quadratic equation in $k$ to solve,
$$ k^2 - 3k + 4 - 2m = 0, $$
which has the solutions
$$ k = \frac{3 \pm \sqrt{8m - 7}}{2}. $$
It turns out that if we take the $\pm$ on the right-hand side as $+,$
and round the whole thing down to an integer,
we get a function $f$ that does what we wanted:
$$ f(m) = \left\lfloor \frac{3 + \sqrt{8m - 7}}{2} \right\rfloor. $$
It also turns out that due to the rounding, the derivation of this formula is a bit forgiving; anything in the form
$\left\lfloor \frac12 (3 + \sqrt{8m + h}) \right\rfloor$
will do the trick as long as $-7 \leq h < 1.$
At this point we have found out how to get $k = n$ in the last $n-1$ terms of the sum over $m,$ in such a way that the sum has $1$ term with $k=2$
followed by $2$ terms with $k=3,$ then $3$ terms with $k=4,$ and so forth.
Now if we can get get $j$ to count up from $1$ to $k-1$ in each of those groups of terms, we are done.
Recognizing that the terms with a particular value of $k$ have
$\frac12 k(k-1) - (k-2) \leq m \leq \frac12 k(k-1),$ we can see that setting
$$j = m - \frac12 k(k-1) - (k-2) + 1 = m + 2 - \frac12 k(k+1)$$
will produce values of $j$ such that $1 \leq j \leq k - 1.$
Recalling that we decided to set $k = f(m),$ the sum is then
$$
\sum_{m=1}^{n(n-1)/2} a_{m + 2 - f(m)(f(m)+1)/2}a_{f(m)}.
$$
You may notice that this expression looks quite different from the one in Yves Daoust's answer. That's because we made a number of arbitrary choices in deciding the order in which we would add up the terms.
Rather than letting $j$ count up within each sequence of terms with a given value of $k,$ we could have let it count down from $k-1$ to $1.$
Alternatively, we could have taken all the terms
for $j=1$ first (there are $n-1$ such terms with $2 \leq k \leq n$), then the terms for $j=2,$
and so forth, ending with a single term for $j=n-1$ (with $k=n$).
Or we could have started with the term for $j=n-1$ and ended with the $n-1$ terms for $j=1.$
That is how Yves Daoust arranged things. The function
$$ k(m) = \left\lfloor \frac{1 + \sqrt{8m - 7}}{2} \right\rfloor $$
is equal to $f(m) - 1$ (according to the definition of $f$ above), so instead of taking on values
$2, \ldots, n$ for $1 \leq m \leq \frac12 n(n-1)$ it takes on the values $1,\ldots,n-1.$
That is, for $m=1,$ the subscript $n - k(m)$ is $n-1$; for the next two terms ($2 \leq m \leq 3$)
the subscript $n - k(m)$ is $n-2$; and so forth.
So that's how the subscript in $a_{n-k(m)}$ is chosen.
For the other subscript, we may observe that $\frac12 k(m)(k(m)+1) \geq m,$ with equality when
$m=\frac12 p(p-1)$ for some integer $p.$
The quantity $\frac12 k(m)(k(m)+1) - m$ is always in the range $\{0, \ldots, k(m) - 1\},$
so $n + m - \frac12 k(m)(k(m)+1)$ is always in the range $\{n - k(m) + 1, \ldots, n\}.$
A note on the practical use of these formulas:
I have actually used a formula related to these in order to use a uniformly-distributed pseudorandom value to simulate a probability distribution on $\{1,\ldots,n\}$ such that $P(k)$ was proportional to $k.$
A similar technique can reduce the storage space required for a triangular matrix by approximately one half.