Polylogarithms
A useful formula that can be applied here is
$$
\frac13\sum_{k=0}^2e^{2\pi ijk/3}=[3\mid j]\tag1
$$
So
$$
\begin{align}\newcommand{\Li}{\operatorname{Li}}
\sum_{j=0}^\infty\frac1{(3j+1)^2}
&=\frac13\sum_{k=0}^2\sum_{j=1}^\infty e^{2\pi i(j-1)k/3}\frac1{j^2}\\
&=\frac13\left(\frac{\pi^2}6+e^{-2\pi i/3}\Li_2\left(e^{2\pi i/3}\right)+e^{2\pi i/3}\Li_2\left(e^{-2\pi i/3}\right)\right)\tag2
\end{align}
$$
Mathematica gives $1.12173301393634378687$ using
N[1/3(Pi^2/6 + Exp[-2Pi I/3]PolyLog[2,Exp[2Pi I/3]]+
Exp[2Pi I/3] PolyLog[2,Exp[-2Pi I/3]]),20]
Extended Harmonic Numbers
Another approach is to use the Extended Harmonic Numbers.
$$
H(x)=\sum_{k=1}^\infty\left(\frac1k-\frac1{k+x}\right)\tag3
$$
where
$$
H'(x)=\sum_{k=1}^\infty\frac1{(k+x)^2}\tag5
$$
Giving
$$
\frac19H'\!\left(-\frac23\right)=\sum_{k=0}^\infty\frac1{(3k+1)^2}\tag6
$$
Mathematica gives $1.1217330139363437869$ using
N[1/9HarmonicNumber'[-2/3],20]
Euler-Maclaurin Sum Formula
Although it does not give a closed form, the Euler-Maclaurin Sum Formula allows us to accelerate the computation of the sum.
$$
\begin{align}
\sum_{k=0}^n\frac1{(3k+1)^2}
&\sim C-\frac1{3(3n+1)}+\frac1{2(3n+1)^2}-\frac1{2(3n+1)^3}+\frac9{10(3n+1)^5}\\
&-\frac{81}{14(3n+1)^7}+\frac{729}{10(3n+1)^9}-\frac{32805}{22(3n+1)^{11}}\tag7
\end{align}
$$
Using $n=100$ in $(7)$, we get
$$
\sum_{k=0}^\infty\frac1{(3k+1)^2}=1.1217330139363437868657782\tag8
$$