For all $x$, if $x^2$ is even, then $x$ is even.
The contrapositive to this statement is:
For all $x$, if $x$ is odd, then $x^2$ is odd.
Why do we ignore the "For all $x$" and not say "For some $x$..."?
For all $x$, if $x^2$ is even, then $x$ is even.
The contrapositive to this statement is:
For all $x$, if $x$ is odd, then $x^2$ is odd.
Why do we ignore the "For all $x$" and not say "For some $x$..."?
Symbolically
$~~~~\forall x \in N: [x^2 \in E \implies x \in E]$$
$~~~\equiv ~~~\forall x \in N: [x \notin E \implies x^2 \notin E]$
$~~~\equiv ~~~\forall x \in N: [x \in O \implies x^2 \in O]$
where $N$ is the set of natural numbers, $E$ is the set of even numbers, and $O$ is the set of odd numbers.
We use the contrapositive of the original implication. The quantifier is unaffected.
Because the contrapositive refers to an equivalent form of the implication, it is thus a tautological equivalence. It refers to the "realm" of propositional logic and not first order logic.
For example, I'm sure you know that an equivalent form of $\phi \to \psi$ is $\lnot \phi \lor \psi$. Would you not then substitute in $\forall x (Fx \to Qx)$ for $\forall x (\lnot Fx \lor Qx)$?