"Minimal" does not really mean something by itself.
What we can speak of is a minimal thing with such-and-such property, which means a thing that (a) has such-and-such property, but (b) no smaller thing has such-and-such property.
Concretely, in a definition such as
If $R$ is a relation, then its transitive closure $R^+$ means the minimal transitive relation that contains $R$.
what it says is that
- $R^+$ is a transitive relation that contains $R$ as a subset, and
- There is no proper subset of $R^+$ that is both transitive and contains $R$.
A definition of this form secretly implies a claim that there is exactly one $R^+$ that satisfies those two conditions. In general this needs to be proved. In the present case one can easily see that we can find $R^+$ as the intersection of all subsets of $X\times X$ that are transitive and contain $R$.